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Table 7 Impact of removal of molecules from the “real” E. coli food set in the RAF and CAF size

From: Autocatalytic sets in E. coli metabolism

Food molecule RAF size decrease CAF size decrease
C a 2+ 7 7
Cl 2 2
C o 2+ 33 33
C u 2+ 27 27
K + 155 360
M g 2+ 1117 1117
M n 2+ 133 133
\({MoO}_{4}^{2-}\) 24 24
N a + 3 3
N i 2+ 11 11
N O 3 3 3
\({SeO}_{4}^{2-}\) 6 6
T r i m e t h y l a m i n e No x i d e 2 2
\(S_{2}O_{3}^{2-}\) 0 0
\({WO}_{4}^{2-}\) 11 11
Z n 2+ 631 631
ATP 1206 1206
O 2 47 47
genCat 492 492
Protein 1352 1352
RNA 88 88
spont 41 41
X 1447 1447
Glutathione 30 30
H 2 O 0 0
F e 2+ 91 91
N H 4 0 0
H 3 P O 4 0 0
S O 4 0 0
I r o nS u l f u rc l u s t e r 0 866
N A D 1261 1261
F A D 0 1162
G l u c o s e−6−p h o s p h a t e 0 0
P y r i d o x a l5p h o s p h a t e 0 673
C o A 1099 1099
H 2 S 0 194
T h i a m i n 2 417
A d e n o s y l c o b i n a m i d e 10 10
L i p o a t e 8 8
  1. *indicates the 7 added molecules.